YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238881052
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIAQELST LPSDLIYLAQ NFPQYIDLKG KLFGNDIIQN QLIYSIICIS FNPIFWNIVA  60
   61 RLEYKTHFLT KICFNSAKLG CYVLAITIFS LGIYRDHVYY QALETQPTYQ PLIDSIIIKS 120
  121 LAIALFAFGN VLVISSMYAL GVTGTYLGDY FGILMDHRVT GFPFNINDNP MYNGSSLCFL 180
  181 ATALWYGKPA GIAVAIYVFV MYKIALLFEE PFTAKIYANR IDKLD

Type	Start	End	Confidence
Non-Cytoplasmic	1	40	0.45
Transmembrane Helix	41	60	0.65
Cytoplasmic	61	120	0.57
Transmembrane Helix	121	142	0.86
Non-Cytoplasmic	143	183	0.65
Transmembrane Helix	184	206	0.77
Cytoplasmic	207	225	0.83