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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.7440
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQEKSEKSS FPKRSSSLRS PSDSPAITSK NVFMFVNYSK DWPLILVGIL LMGGSAIATP  60
   61 MNTYIYGEIM GKLSQFYLQD QSNHSFSQDI VKLCVGLIGI GCCKMILVWL GMFTWLKFGE 120
  121 IQQSRARMQI YNKIINESQS WYDSKQNLIG QLTQINRCIE ELRSCNGEIL ASLMQTIVLI 180
  181 LALLIMSFYQ SWSTTLIIMA SFPIMALCGW YFGKLTYKAQ QDENEVTSKA SKVFNWCYVN 240
  241 PEMVRFFNSK NIELTKFKQL IEKSAQFYYK LSHAVAANTA VLKTLTLMMF VQGFWFGNYL 300
  301 LSHKTITINQ LFTCFSSCLM LGQAVSGITE LLAILNTGHA AADKISGFLL QPPSKAKLLL 360
  361 LHSKYPPFEI GSIYFKNVWF ESNSQNSVAI LQDVSFGILQ NQFNYVIGKS GSGKSTIAKL 420
  421 LMRLYSVSRG TIEIDTVSID KLDPKYICQN ITLLEQNPVI FDDKTIAENI AIAIVDDYDS 480
  481 LQAIPYYLIE QSAHFALLSD LDLNMKVNHL TLSGGQQQRI SIARAYLKNS PVLIMDESFS 540
  541 ALDTETKQGL IEKVKKWRIG KTTIFITHEY KNILDDENVI ILDQGMIKNQ GQFKKMKNEE 600
  601 IVQNYKSQGI ETSSYETTSQ SFSDNTKLPD GDYNYKTNPY ILKDLESQIK EDTDNEKLMG 660
  661 VLAILRYCSS TINGKSLLGF GILLAIFQGV SSPVFSYCFS KLLSTSLDSS IGLNSTQKIL 720
  721 QWSCISLSIA IFTGVTSYLS EFILNYCGEN WIVSLRQLTF FKLNNQDLSF FTGFDTNWSS 780
  781 SEITALLMND TRDLRNLISQ FFPLLANLVS MTLIGIIWSI VSGWKLALVG ISFVPLVLLV 840
  841 TVLYGKILES IENKYKCKVN NVELDLYRTI TTIRTIKIFN IQQYFETVFK EDLKVLNSIG 900
  901 VYRALQTGIG FAISDLFSSI GQAIILFYGM KLISQFQYNY SQLLQVITLL SFTISNASIL 960
  961 IHQLPEITRG QRAGTFIVKL LKDITSTMEV NDSCGVSSVR KRNSKSGSDS IGTIGPVKDN1020
 1021 QLFKKVTTDN DTLAISFNNV SFSYPNKLHY ILQLKSISLD VKKFTTIGIV GQSGSGKSTI1080
 1081 LKILFRLYDI KISPDSNTTK KYHDQTVKIF NQNLYLINSG LLCQTIAIVP QFPKFFSGTI1140
 1141 YDNLTYGINN TNSAGSNSSS SVSDSEIIKI LKLVNLHQFI VSLPQGLLTI MNDSDNDNDN1200
 1201 GNENENENEN GNTISTSSST SFTFSGGQLQ LLAIARALLR NPKILLLDEC TSNLDPITTK1260
 1261 IIINVIKSLH GKLTILFVTH DKELMRIADN LIVMKDGQIV EQGDFQQLIS NDGEFTKITK1320
 1321 TII

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle