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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.9754, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPELDLEENN PLLPPSQIND ENYEGSIFGE DARFCPNSRQ VFRICSNLKL LIDKIIPICF  60
   61 KEDEITSSNS AILSDPVIDL VYQAAGGKGD GKEGTSSYKY RGSLVFCLLK VCDWYWQQAE 120
  121 FELSDNELYS LRALTAQTIA AIIIEREKRD KYLFLNMLCH RYTICVNGVD ATPVSALEMA 180
  181 VDMHSTIVIG SSGYQRCIKW LWRGWIIQSS TDPHSYVLYK GAASQSFRTH FDPARIKTPL 240
  241 YQNILEIFLS IIYLIIFTIV VNTHSTLTGD IDFFETVLYL FTVGYILDEL IKFYHVGWNY 300
  301 LGFWNAFNDT MYCILTVAVC FRIASVNSHG ATRIKYDEIS FRVLACASPL MWSRLLLFLD 360
  361 AYKFVGAMIV VLKTMMKESI LFFFLLFVVI VGFLQGFIGL DSSDGKNEAT QRILISLVKA 420
  421 VIGGSSFEDM GNLVPPYASV LYYFYQFMLT VILMNILIAL YSTAYAAIVE NATDEYFALV 480
  481 AHKTLRYIRA PDQNLYVPPF NLIELLITPI GWFVSTSTWK NINYYVMLVI YSPLLAYITS 540
  541 DELSNARRIQ YNRFKGVPDD ANEIDTEWDL TDGYDEDSPG DGDDCWDRIR ERNSEITEEL 600
  601 RIQREGERQD PEFMINTHQF SEKIDKIVKP VGQASKVGVN WQIYEVIEKI DKLTNLLEVV 660
  661 VAENKELKKK LENKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle