YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DRE2_CANAL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSINILLL LHPTVVTDAQ LVEQIKSKIY QSHNNNNNNN GGTTTTTTGT VNINLNQQII  60
   61 DRVTKGIIEL PYDYYDEIIY INPNNESQYR EIPISLMQLI YKLLKSNGKF KGDLPLDQNL 120
  121 DVLMTGFIIE EEEKEKEKEE NNLEGELVNV WVKPIPVDEP VVTLLKKKTT TSNTTTIKKS 180
  181 LPLFKKLNKD EINNSDKDIN NDNITNNNNN NNNKRKLVET KLTYFSSDDE NSSDGSVLEN 240
  241 DDIDDDDELI DENDLLNFNN NNNTNGGSLL SDKLITPRKC DISLNGGKKR KKACKDCTCG 300
  301 LKELEELEVS NQQNLQDQIL GKLAQSATLE AIKIEERLKQ QQQQQQQKVK VKFTEEDLSE 360
  361 IDFTVQGKTG GCGSCALGDA FRCDGCPYLG LPPFKPGEVV KLDGFGEDI

Type	Start	End	Confidence
Signal Peptide	1	19	0.89
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	409	0.99