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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.2915, orf1...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLRRSDNS NEKYGIVIDS GSSGSRIQIY KWTDQKFELK SSKDQSVLQS PPKITQEKGW  60
   61 TKKITPGIST YNSKDKFGRI WQDHYSELLK FAEGIIPSEK QPETPVFVLS TAGMRLLPKK 120
  121 TQKSIVKETC TGIKQNTNFY IPTENCENFV EIIDGSTEGI YGWLGLNYLM KQFNNYDSSQ 180
  181 DILHESIGFM DMGGASTQIA FVPSSKEQIT KHKEDLSTVT LRNINGETQT WDLFVATWLG 240
  241 FGANQARKRF LNQLINLAIV NGENWNSEIN DPCLPKGASM EYNYENKKYL VKGVGNYEMC 300
  301 IKTIYPLLMK NMVCIDEPCL FNGIHGPKFN FEKDKFIGIS EYWYTANDIF QSGGEYNFKT 360
  361 FNAKVKEYCE SNWDEILKNS EQGQYSKLDP DKFLKDACFK ASWVMNVLHE GFELPRIGFE 420
  421 TEKEDQTEED KKITNAHVPF KSADSVEGEE LSWTLGKILL FASSQIEPKE GDTEAKQIGI 480
  481 YPSQISGHKF VPGGVLLSSD GDYSTDDEDD DLGGQFSHIL YSLIFVLLLL FFLFHFGKSH 540
  541 FGRWTNKFRR FQIPVEVKRA VNSIGSKIPG VRHYFENIVM FSDLQDQNII LEEGIFDNTS 600
  601 SNNTNFKSLQ NQQQPASASV LRTRSAIGLN EDSGNDHKSG SAQSLSNFNS KGNNYYNKSF 660
  661 SSPNKNIYIS ANNSRESLAR ASSNASIPRS KSSLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle