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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MPH1_CANAL
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIFATPKVC KGKTRILYFY LSKLFFYVYF FFLIYYSIQK HSYINSTMPI IPLEDDEDDD  60
   61 WILEDEDDPE FQAILQGNSS KGPAQRTLEG SVAAVSTRPQ NDKYETIPVP VKINTPTHHA 120
  121 MDFENLKTYI YPTNFEIRDY QYNIVERAFY DNLLVALPTG LGKTFIASTV MLNFLRWFPI 180
  181 SKIIFMAPTR PLVAQQIKAC CSIAGIPSSK VAILLDKTRR NRAEIWNSRQ VFFTTPQVVE 240
  241 NDLASGVVNP KSIALLVIDE AHRAKGNYSY NNVVKFINRF SDSYRILALT ATPASDVEGV 300
  301 QQIIDNLNIS KVEVRTEQSI DIVRHMKRKT VERKTCYPSS EITECIELLA EGITPVLNTA 360
  361 KERGLLDLTD PTRINFLQCM EISRKIVANP TIPEGLKWSN YFILQLLGMV GQCYRRLNIY 420
  421 GIRSFQSYFN EKFLEFKTKW NAKKSTNKLN ADFYFSDPIT TLMDRVEELS KTLTYGHPKI 480
  481 EALMEELDDF FKNHETAGSR VIIFTEFRES ALEIVQCIEK ANDNRKPHIF IGQSKEKEKF 540
  541 DVENFGKKKQ KGQTKKKKDE RPSTRSSSEN AQMTGMSQKL QKEIIKKFKK GVFNILVATS 600
  601 IGEEGLDIGE VDLIICYDST SSPIKNIQRM GRTGRKRDGK VLMLFSSNEE SKFDKAMGGY 660
  661 EYIQQHIMKG DFIQLRPQHR MIPDEYKPEA VKQLIQIPEE NIELKAEDDE DEIIRIATSY 720
  721 MLGGKGKKGK KANNNSTKKP AKTFFMPDNV ETGFKSAATM VRKVGDNKSL AERNKEKTFL 780
  781 DKLVDSDSDS EVDKENENVI QEVDKSKNQE QNDHIITELD NTEQSVAGNT KSTTNGTSYS 840
  841 EPENNNQVNQ ESVTANLDSV ARVPEPEVIE NSESEEEQIS KITHNTPATS VDLSNGPEET 900
  901 SYKIDSVLID LIDDDFTFSS DTEGDKVEVI DAVSPEVCKL PEKPATPPIR KSLGVKRKVN 960
  961 KTPDPESNSI SIPSSTTKKS HNEVTRKVVQ DPSTTNKKSL GVKRPRPVSI IDQLKRQKIR1020
 1021 SQVIVSRETQ SIIEHESRTQ SSLPSPRNTS DEISEIDVII DLDDDDDDDN KVNGHDKSQT1080
 1081 TISKVQPIYE FSNKEDEGFL SSSQTRELYK NYYIAIDSSD DIPFYDPVQG FSKIKDTDKF1140
 1141 TMGRTGLITH SLRTQRLFQA CNAEYDSQLA AQTKDNDKQD YTFILKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle