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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.2881
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTIPQYFI RIFNLIFSAR RKNFQLALIS GLLFFGSFAI LSTTSYSKKF NYFDDLILKI  60
   61 YDYNYLTNNY NIDYLAKNDP EAYFNVKVQQ IVDEKKQHDL ESKFWSLDTK INDDQATLQI 120
  121 PAYFTYNKPR DNKNLEDSEQ SSKPVEKPLI QPFDPRFTLA MYYYYLDQQM TTAHHDSSSS 180
  181 SSENSITVPF NWYDWVDMSV LSKYLLAPNK DKPDCSILDA HEDARKIETE KKKMEKLAKQ 240
  241 WDENKRKAEE EKKKAEEDKK KEEEEKKKAE EEEKQRHEQE KQALEEDKKK LEEEKKKIEE 300
  301 EKNKLQEQQQ QQQEEKANDG NQKHSKFVKR DDEIKMSTSQ DKSDSDSDRA KIDMTTFFNE 360
  361 AFEKLSDEDK ASVAKDVEDA VKKITQPSSW CVPNAKLSID HSDKQIVHPG FNVFKSPGRT 420
  421 TPQKAIIAGK SFLYSYAPPP SSILFLTSEG SYSVNVQHSA PLLRNGIPES YLANNNFDVS 480
  481 LNVLQQLHKL KKNHKPDTAK VINDYLLHIP KESFKYDPDS IIFDYTKRLD KGEKLTIKEL 540
  541 KYLQSLEYSK DKVAHGGPPK YFAESRLIGT TVGDHYDWRF FNGVQFGTVD QSLTLHRLIR 600
  601 TWLSFTRKSG ITTWIAHGSL LSWYWNGMAF PWDNDIDVQV PIMDLHKLSL QFNQTIVVED 660
  661 PEDGFGRYFL DIGSFITLRE KGNGNNNIDA RFIDIDTGLY IDITALALSN SETPKSDLAE 720
  721 LPKNFEIKDN NYKPANELLQ IYNCRNNHFN SYDELSPLMK SSVEGEIGYI PSRYSTILTR 780
  781 EYRSGLSSNS HGGYIFIAKL RLWVKEEDLY YFIKHRDQWT KYHSFNTKLS QDPSNTLLQD 840
  841 YSYLMSEQEY ENLQYSTDLE HDNPFKKTKK PLELKNSELE KLKHMNESEL LQFLNNDDIL 900
  901 IQFFNAKEFT SFHESEIMQL TFGKSTAKLM SSAIDFPPIK YEPYLYKLNH DLDTFENKVD 960
  961 RYLALQDAYQ QEHNNSPSGS SDNGFMEIEE DLDFAF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle