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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.10645, orf...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFLRSTLA KSVLAASAAV GGTVVYLDFI RPKNEPHLAT SYKPFNKDIP PPPSRESLIG  60
   61 NLKKVPQFDV LVIGGGAVGT GTAVDAATRG LNVCLLEKTD FGAGTSSKST KMAHGGVRYL 120
  121 EKAIFQLSRA QLDLVIEALN ERGNMLRTAP HLCTVLPIMI PVYNWWQVPY FFAGCKMYDW 180
  181 FAGKQNLRSS TIFSTEQAAA IAPMMDTSNL KATCVYHDGS FNDTRYNVTL ALTAIENGAT 240
  241 VLNYFEVEQL LKDSNGKLYG VKAKDLETNE SYEIKAKSVV NATGPFADKI LEMDEDPQGL 300
  301 PPKVEQSPRM VVPSSGVHVV LPEYYCPTTY GLLDPSTSDG RVMFFLPWQG KVLAGTTDTP 360
  361 LKKVPENPVP TEEEIQDILN EMQKYLVFPI DRNDVLSAWS GIRPLVRDPS TIPKGQEASG 420
  421 KTEGLVRSHL LVQSPTGLVT ISGGKWTTYR EMAQETIDYV VKHFDFGDKK ILPCQTNKLI 480
  481 LVGGTDYSKN YSARLIHEYH IPLKLAKHLS HNYGSRAPLI LDLYAESDYN KLPVTLAATE 540
  541 EFEPSEKKAN EDNQLSYQRF DEPFSIAELK YSLKYEYPRT PLDFLARRTR LAFLNAREAL 600
  601 SAVDGVVEIM SKEYGWDKET EEKLRKEARQ YIGNMGISPK KFDVEKIVIQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle