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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.13237, orf...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRDTPDSLS SSLSSATPHY HPHKHDKKKS MLHYFQLIIR SITYDLVLFF FDCVIHTFFR  60
   61 DIRSTGNFNI PQEGPVIFVI APHHNQFVDG LVVMTKVKEI SNRRIAFLIA KKSYDRMVIG 120
  121 QAAKLCGCIP VERAQDFLKL GQGKVFVDPN DDCVLIGENT AFTKQCQKKG LIGLPNSLGN 180
  181 CQIASIEDDT HLTLTKPFGS KNSEIQSRID KAFRDGTSFK IAPHIDNHVV FENVFNHLND 240
  241 GNILGIFPEG GSHDRPDLLP LKPGVAIMAL GAIAQQMEEC EENDNNGKEQ KEIQPISVVP 300
  301 VGLNYFHPNK FRSRVVIEFG KPIVVDQSMG KEYMEHHRDT VDKLLKVVTF GLKQVTLTCD 360
  361 DYDTLMVLQA ARRLYTSTNR EQIPLPMVVE MDRRLIKGYQ QYKDEPDVKK LRDAVYHYNR 420
  421 TLMRLNLHDH QVESLDKFDK LKTFQMFVSR FFKFSLFMGL SLPGIILFSP VFITSKKISV 480
  481 RKAKEALAAS SVKIKAKDVI STWKILVALV LAPALYIFYS VIGTYLIVKS QIVPQLSTII 540
  541 IFIICYGWAV LTTYASLRVG EIGVDYYKSL KPLFISLISY EKDQLQIREL KKTREELRQR 600
  601 VNLFCNNYGP GMFQDYDEFY RNYNQMETET DYDEFKQSHK PLRRQNSWTS MDLTLNNLSD 660
  661 IPIFSAADLE QSNDISTSES SDEVNDEKEV EVEDVGDHSN EVSVRLRNAI RERRQNSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle