YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76573798
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIELPFEIP KDNPVYINIQ KFSVTYQKLV DESVPYTSRR WIGFGILLSL FLLRIFLSQG  60
   61 WYIICYALGI YLLNLFLAFL TPKFDPSLEQ ELKNESIEEG LDQEDPISQQ SNQKYDDDDD 120
  121 DDDDEFRPFI RRLPEFKFWY NAIRATIIAL ILTFFNIFDI PVFWPILLMY FIILFTLTMR 180
  181 RQIQHMIKYK YLPFDLGKTR YRRT

Type	Start	End	Confidence
Cytoplasmic	1	36	0.93
Transmembrane Helix	37	57	0.83
Non-Cytoplasmic	58	61	0.76
Transmembrane Helix	62	81	0.91
Cytoplasmic	82	135	0.95
Transmembrane Helix	136	155	0.89
Non-Cytoplasmic	156	161	0.67
Transmembrane Helix	162	180	0.91
Cytoplasmic	181	204	0.94