YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76573815
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAYSEILKP RIIPISSSKN DVPPPPGYSE SVFSTATKSS TSSGKKTKHD DADLNALKSK  60
   61 KIWELAIGPA KSIPMNLFMS YMTGNSLQVI SVTMTLMLLW NPIKAIFNET NPTFSKLSTK 120
  121 NNGSEIILAK IVFIICQVLN MGIGVYKLYK MGLIPHQEAD WLAWKEPKKI IDRLYY

Type	Start	End	Confidence
Cytoplasmic	1	80	0.83
Transmembrane Helix	81	100	0.77
Non-Cytoplasmic	101	125	0.81
Transmembrane Helix	126	146	0.80
Cytoplasmic	147	176	0.73