YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76573849
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYTSLLNHG DTTNPSKLLL QIVILQCFYY LSALVIFYLV ASLNGYDFKI DWVFSWELVE  60
   61 PDNAMGLTLF MMWLFDALLC VLFVTVIVGR SKLAWDFAVT VYIINLIVVW TYTGKFPSSI 120
  121 LWWCLQVLSA VLLVTLSTYS TRWNELRTTF FDGMVDTTPN DIEMQNIS

Type	Start	End	Confidence
Cytoplasmic	1	19	0.95
Transmembrane Helix	20	42	0.88
Non-Cytoplasmic	43	63	0.92
Transmembrane Helix	64	87	0.89
Cytoplasmic	88	92	0.88
Transmembrane Helix	93	113	0.91
Non-Cytoplasmic	114	118	0.87
Transmembrane Helix	119	140	0.91
Cytoplasmic	141	168	0.96