YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.7264
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLQRLLGQ GAGLGGAAPT QSDGPAIDNS ETVYISSLAL LKMLKHGRAG VPMEVMGLML  60
   61 GEFVDDFTIH VHDVFAMPQS GTGVSVEAVD DVFQTKMMDM LRQTGRDQMV VGWYHSHPGF 120
  121 GCWLSSVDVN TQQSFEQLNK RAVAVVIDPI QSVKGKVVID AFRTIDTTTL MMGQEPRQST 180
  181 SNVGHLNKPS IQALIHGLNR HYYSLNIDYH KTEYETNMLL NLHKKNWQSG LKLVDYNHKE 240
  241 VENLDNTEKM VSIAKLYNQR VQEEKELTED QLKTRYVGKQ DPKKHLSDTA EKLIDENVSS 300
  301 LLTSNIDAVA IQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.76
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	312	0.99