YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.3527
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRTAYKTMN QSMVQKFIAG GVGVTGLTAS YLLYQDSMTA DAMTAAEHGL HPPAYNWPHN  60
   61 GMFETFDHAS IRRGFQVYRE VCAACHSLDR IAWRNLVGVS HTTSEAKAMA EELEYDDEPD 120
  121 DEGKPRKRPG KLADYIPGPY ENEQAARAAN QGAYPPDLSL IVKARHGGSD YIFSLLTGYP 180
  181 DEPPAGVVLP EGSNYNPYFP GGAIAMGRVL FDDLVEYEDG TPATTSQMAK DVSTFLNWAS 240
  241 EPEHDDRKKW GLKALVVLSS LYLLSIWVKR FKWTPIKNRK FRFDPPKK

Type	Start	End	Confidence
Cytoplasmic	1	12	0.62
Transmembrane Helix	13	34	0.61
Non-Cytoplasmic	35	288	0.86