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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.9804, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKHSEDPIK GVKVQKRKVV SIASTSSSTS THQQLMNQAT KMKRTKINEM KKQKQDFFKR  60
   61 INYSHLLTVV VLPLLAVLYV VLCKQSIVPE NERTLYFTCI YYNITMLAFT SGYHKYFAHN 120
  121 SFKVKAELLK YYFCIFGSSC GLGSVRWWAG LHRAHHHFTD DTERDPYSIK RGFLFSHYAW 180
  181 LLKKPKLTKF YLDFLEQEFP EHAENQKVQN EIVLDKEIET EYNGEDIMRQ NYDESLRNLL 240
  241 MWQQRTYLFW FFVTTILIPA LITKYVCGDS IVHGILYPGI LRMFLCQQSL LSTESICHLK 300
  301 RIQVTIPTQP FNDKNSSTNC NNPLVSFLTY GQSHQNYHHE FPHDYRVDNS YLTYDPTKWF 360
  361 IWILEQLGAV DELSRTPGNL IVQLKLQQQQ LIINRTKSQL NWGTPISKLP LISPSDFKKI 420
  421 ISSTLNKDRI YIVIQNIIHD ITPFMDQHPG GVALLKASHG KDATKAFYGG VYGHSTAAVN 480
  481 LLATMRIGVL DDGDDEEVWR RVAREEREVS NSTDSRPGHH HTAEAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle