YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.9783, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVTNVISFA TVASTAVSLV IPDITSFFSS FNQILIPHHQ QALLINQDAH LPSDDNQPDT  60
   61 KTGILSNPLN KIIPNHYIVV LKDDLSQAQF LQHQNWVQNE HVSISSCKSN VNKKPLEFFQ 120
  121 IDNFVRGYTG FFTDDLINKI LELPEVAFVE RDSIFHTVEF DIQKDATWGI SRVSHRENID 180
  181 DGKYLFDNDG GKGVTAYVID TGIKVGHPDF EDRAQWGASI AFPNIKQDYN GHGTHCAGTI 240
  241 GSKTYGIAKN VNLVAVGVMN MLGAGSTSDI IKGLEFVVKS HQDDVRAKKK GFKGSTVNMS 300
  301 IGGGISDALD LAVNAGTKAG LHISVAAGND NADACQYSPA RATGPITIGA SNIRDEKASF 360
  361 SNWGSCVDLF APGEDIESTF IWSDTTVMSG TSMASPHIAG LLSYYLSLQP DVTSEFYTQA 420
  421 IEPADLKNKL IKYGTKGVLT GLDSVSPNIL AFNGAGGNLT DFWSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle