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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33310026
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVSQILPLA GAISVASGFW IPDFSNKQNS NSYPGQYKGK GGYQDDCGDD YKKGYKSKTY  60
   61 SKVKPITSTD CTTPIQPTGT TTGYTKDVVE STSYTTDTAY TTTVITVTKC DGGSCSHTAV 120
  121 TTGVTIITVT TNDVITEYTT YCPLTSTPAT ESTPATESTP AIESTPCTTS TETTPATEST 180
  181 PATESTPATE STPCTTSTES TPATESTPAT ESTPATESTP ATESTPATES TPATESTPAT 240
  241 KSTPATESTP ATESTPATES TPCTTSTEST PATESTPATE STPATESTPA TESTPATEST 300
  301 PATESTPATE STPATESTPA TESTPATEST PCTTSTESTP ATESTPATES TPATESTPAT 360
  361 ESTPATESTP CTTSTESTPA TESTPATEST PATESTPATE STPATESTPA TESTPCTTST 420
  421 ESTPATESTP ATESTPATES TPATESTPAT ESTPATESTP CTTSTESTPA TESTPATEST 480
  481 PATESTPATE STPATESTPA TESTPCTTST ESTPATESTP ATESTPATES TPATESTPAT 540
  541 ESTPATESTP ATESTPATES TPATESTPAT ESTPATESTP ATESTPATES TPATESTPAT 600
  601 ESTPCTTSTE TTPATESTPA TESTPATEST PATESTPATE STPATESTPA TESTPATEST 660
  661 PCTTSTETTP ATESTASTET ASSTPVESTV IVPSTTVITV SSCYEDKCSV SSVTTGVVTI 720
  721 SSEETIYTTY CPITSSITIP VPNTSTPAAP GTPVESQPVI PGTETTPAAP GTPVESQPVI 780
  781 PGTETTPAAP GTPVESQPVI PGTETTPAAP GTPVESQPAT TPVAPGTETT PAAPGTPVES 840
  841 QPATTPVAPG TETTPAAPGT PVESQPVIPG TETTPAAPGT PVESQPATTP VAPGTETTPA 900
  901 APGTPVESQP ATTPVAPGTE TTPAAPGTPV ESQPATTPVA PGTETTPAAP GTPVESQPAT 960
  961 TPVTPGTETT PAAPGTPVDS QPVTPGTETT PAAPGTPGTE ATPVTTQPVS VLSTSQVVTA1020
 1021 SGEFSTVTAH STSIVASCPE GGCVPEGQQT ETSPSVPTNG PEVEASSSVL SIPVSSVTTS1080
 1081 TIASSSETSV PPAQVSTFEG SGSALKKPYY GLAVAALVYF M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle