YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.1386
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRYSAAGG AHQRDLRTQL FSSPSVGIRT PSKTPPSRTA SPYDPSPNNN QAKYNESLLN  60
   61 SLESQNNEEM DTMGQKVAML KNLGEKMGVE INKSIKLNDD ITNGFEKGKI TLKNTYNKMI 120
  121 VMSQRAGITW KMWGMVFLIV FLWFFYVWLF

Type	Start	End	Confidence
Cytoplasmic	1	127	0.99
Transmembrane Helix	128	147	0.96
Non-Cytoplasmic	148	150	0.72