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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.3618, orf1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.70
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVSTIFAAA SALFAATTTL AQDVACLVDN QQVAVVDLDT GVCPFTIPAS LAAFFTFVSL  60
   61 EEYNVQFYYT IVNNVRYNTD IRNAGKVINV PARNLYGAGA VPFFQVHLEK QLEANSTAAI 120
  121 RRRLMGETPI VKRDQIDDFI ASIENTEGTA LEGSTLEVVD YVPGSSSASP SGSASPSGSE 180
  181 SGSGSDSATI RSTTVVSSSS CESSGDSAAT ATGANGESTV TEQNTVVVTI TSCHNDACHA 240
  241 TTVPATASIG VTTVHGTETI FTTYCPLSSY ETVESTKVIT ITSCSENKCQ ETTVEATPST 300
  301 ATTVSEGVVT EYVTYCPVSS VETVASTKVI TVVACDEHKC HETTAVATPT EVTTVVEGST 360
  361 THYVTYKPTG SGPTQGETYA TNAITSEGTV YVPKTTAVTT HGSTFETVAY ITVTKATPTK 420
  421 GGEQHQPGSP AGAATSAPGA PAPGASGAHA STANKVTVEA QATPGTLTPE NTVAGGVNGE 480
  481 QVAVSAKTTI SQTTVAKASG SGKAAISTFE GAAAASAGAS VLALALIPLA YFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle