YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46436072, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLCLSDLFL IILSVLFPPL PVWIRRGCCS CDSLINIALC MLGYFPGLIH SWYIIAKYSS  60
   61 YYYQQQQQQR KDTIYYVYRS DLENQTPRRD GRDGRDECHH DHHHHHHHHH NQAESQSAGL 120
  121 IVSNNHNNNN NNYGSVVEGS SSSNLTPVAP IPVENGAPPP AYTEIDNKTQ H

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.38
Transmembrane Helix	8	24	0.52
Cytoplasmic	25	33	0.42
Transmembrane Helix	34	56	0.60
Non-Cytoplasmic	57	171	0.83