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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4109, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQTLKKRGG NSSGRKSPTT SNIEFDDKKT EFDLNAIVPP KEPEYKYLAA LTLVTLLAIY  60
   61 TRFTKLGTPN KVVFDEVHFG KFASYYLERT YFFDLHPPFA KLLIAFVGWL IGYDGKFKFE 120
  121 AIGDSYIENN VPYIAYRSLS AIQGAAIVPI MFLTMKTLGF SVAACLFSSI IVCFDNAQVT 180
  181 DSRLILLDAT LILSVALTIF SYSKFSTFRK QPFSSKWWTW LLATGVSLSC VISTKYVGVF 240
  241 TYLTIGIAVI HELWILLDYR KGLTLQEFAK HFFARLWALI IVPFCIYLYW FYLHFAILTR 300
  301 SGPGDAFMSS EFQETLLESP LAAHSKPVQY FDQITIKHKD TGAFLHSHQH EYPLRYEDGR 360
  361 ISSNGQQVTC VVQENAANDP NNQWEIVPTS EGANKGTKVY TNDIVRFRHV GTGGYLLTHD 420
  421 VASPLKPTNE EFTVVYDDVA QQRYNETLFR LRLHVPGSNP KKEKNKKEIK TLATDLRILH 480
  481 VDTVVAMWTH NDELLPEWAF NQQEVSGNKK IPDKDNIWNF DLITNLQSTD PRNQYVPKKV 540
  541 KTLPFLRKWW ELQMLMFHHN NQLSSEHPFA TQPGEWPLAL SGVSFYNDNT EKKQIFFIGN 600
  601 IIGFWLEVCF LSIYIGILLA DQITRRRNVH VLSDRARSRL YNTLGFLFVG WAAHYLPFFL 660
  661 MNRQKFLHHY LPAHLVAALF SGGLVEFICS NNSARPNGKP VGVNKYKIIA VVAACSTAII 720
  721 WFFFYFRPLT YGDVYLTPEE VKARQWLDIK LHYGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle