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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4099, orf1...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMTTHFLYD RIRGCFLSSL VVGHVTFFVW FPGQPTRFSF DQLQTVTDAF KLDSSNLRKQ  60
   61 LSDFLERENK LTLLASKDPL LSRNLTANAN TEAKTKQSKI ADESFAQLLQ GLSGPPLTVA 120
  121 FASDGGNAEA VAKKVNRQAL GRGLKSVVLQ MDDLSVEDLP TETNVVFITS TSGQGEFPTN 180
  181 GKQFWDGVKN TTDLDLSGIR FSVFGLGDSQ YWPRKEDKHY YNKPAKDLFA KLKLYGGVEL 240
  241 ADIGLGDDQD ADGFSTGFNE WIPKIWAALG VDNVEGVEEP KPITNEDMKI GSDYLRGTIV 300
  301 EGLNDQSTGA ISAVDQQLTK FHGIYMQDDR DIRDERKAQG LEPAYTFMVR VRLPGGIATP 360
  361 DQYLKMDELA DERGNGTLKL TTRATFQLHG VVKHDLKPAI RGMNSALMDT LAACGDVNRN 420
  421 VMVSALPHNA KVHGQVSQIG ALISEFLLPK TTAYHEIWLQ GDDAGDKPGY REAWENRKEG 480
  481 PTKKKTLVAG NVLADVEPQY GVTYLPRKFK IVITVPPYND VDVYAHDVGL IAIVEDNEVV 540
  541 GFNVLAGGGM GSTHNNKKTY PRTGSMLGYV SKDQVHIACE KIMLVQRDFG DRTNRKHARL 600
  601 KYTIDDLGVD VFKAKVEELL GYKFDEPRPF KIESNIDYFG WCKDELGYNH FTAFIENGRI 660
  661 ENTPELPQKT GLRKIAEFLK SGNRSGEFRL TGNQHILISN VSDQDLDEVK KLLAQYKLDN 720
  721 TDFSALRKSS AACVAFPTCG LAMAESERYL PVLITKLEEA LEEYGLRHDS IVMRMTGCPN 780
  781 GCARPWVAEV ALVGKAYGAY NLMLGGGHHG QRLNKIYRYS IKEDEILDIL KPLFKRWSLE 840
  841 RNENEPFGDW CIRAGIIAET TEGKYFHDDI PEDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle