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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.9834, orf1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKQLYFFLV CLLWTTVNAS RFDVEHALVL YDPELLPLND TSSLTPEVAQ FIEYLSDKFD  60
   61 VKISDYNSED INLFFDDYPR YEHLVLFPSS KKTITSKEAL SSHSLLRFIN ENSNIFVVGG 120
  121 SQSVLPDGLR GFLNELGVFP SPKNYKYIDH FNSKNGVVQL NRDNVVEGNR LVQELSVTKY 180
  181 DGNAALISNN ELIFPIVRSS ATGYTNKVGE PIDADKTWTF GEQGYLAVGF EALNNARLVW 240
  241 VGSNSLLAEP QLYKWCFQQQ GKLKLQFVEH IKADEPSKPN PHLYRIKDQA IYTIGVSEFV 300
  301 DGKWIPFEVK DEKDQLQLSF KMLDPYQRLN LKPLGPVSAI SNSTELDTYA YFVNFTVPDH 360
  361 HGMFTFELDY KRPGLSYLVD KRVVTVRHFA NDEFKRSWDI SNSWLYVASA VFVIIAWFVF 420
  421 VVSYIYIGKS NYSKKNV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle