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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.2347
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAKQKIKIL IGVIIVIATY HFIVSSNVRS KDLTDLVDLG SLDKSTTENE RPKNNIVTNN  60
   61 RLDNPPNEDI PHAEPDSPPQ VPPKSGNKAD FSIFFEGLEK FAIKQPGIKD KYTSEKAKEK 120
  121 FSTDDNFLFG KEYLENVLDI PQATFKELKD SHKRYVDEHI PKMLQRVKTF GSLAPSDKEW 180
  181 ESYRGSSGYI IVGGGRFTWL SFLVIKQLRA TGAKLPVEMF IATESDYEKE FCEKVLPKYN 240
  241 ARCNVFDYKL ADDLKKRFDI GGYQYKMLAL LSSKFENVLY LDSDNFPTRN VDYLFESDLY 300
  301 KENNLLLWPD AWARTTNPKY YEIAGVPVKE NKLRYSKYDE KQAGGKDKLK PLSEYTFKDS 360
  361 WYHDFEGTLP DPTSETGMFM INKSSHLKTL LLCLYYNVFG PQYYYPLLTQ GSAGEGDKET 420
  421 FIAAAHVMKE PWYQCARQFK WTGYVSKVDN KFTSKALAHY DPVQAQDTTR QDVDIIFMHL 480
  481 SYPKFYPNWL ADNHDLVYAD TDEHIRMYSS INKNVGYDFD LRVMQFFTEG LCPNYYDSKT 540
  541 GKPIENIPHI DYTNDYMGNH LMYVKDEEQN NIDRCNKVFI PHLKWLKETA EIPTVVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle