YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.681
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAKGPNIIP KQAPSPIAIA GSPPSSSAST PRSAASPPVS VNTKYSPNTN SNTIMPRQVM  60
   61 SIQTSKEWVL PPRPKPGRKP SVDTPASKRK AQNRAAQRAF RERRATRVQE LEQKLMEVEK 120
  121 ERDIKEMALV NTINKLKVEN QFLVKNLEQL KGEMNQMKQS FSRSQQQLIS KSSPAASTAS 180
  181 AQQIKPTFSF ASNSAPSSHP SPSHHNSISP TGSSYSVQQI SPAPSTDSPP NSYNLSNDSY 240
  241 RQFHSTLTPI SNNNTPDKPL SAADVANFDC GVCPKEECLC ESVGLKEPTK DKTENAKKKL 300
  301 QDQVNSFKPM PAVSLSRKRK IKSTDEEQEI DFTKQFSVKA KPMPDLKKLK KTTFSQPQTE 360
  361 TASTFNEDSP VDNCGFCSDD TPCVCREAAK EAAKLNEYLN NPHQSSIMEE EISEEAKTLP 420
  421 PLQTNNPNHN FSKSALPVMH PGPTVEIREF TNINAVPNVL PASKNENEKE ESTKDTSSDG 480
  481 GCTGNPGTCR QCQMDPMSTL FCTTVASRST KSDSVSSTRQ SISRTNSKTS ISIDSLNNPQ 540
  541 SPIPPPLLAN NKTGGSNAPT PTPAPSTPSH SSSVSSNSGI FIPCADAYKT LSRHKKFNSV 600
  601 DFTTLVGKLT TRGMQVEVQS VANVLRELDR RAYN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle