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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.11177, orf...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLSTIWLF LITITAIFQL GLSSNVTTII DDDNNNNNNN NNNADDFLEP QIETIKVIGN  60
   61 KFFECESGHQ FFIKGIAYQK TRQEGEIYDT TKEPHYIDPL ANPFTCLRDL DYLKELGINL 120
  121 VRVYQIHPNA NHDVCMNAFA EAGIYVLADL SEPTISIRRD YPHWDTEIFN RYQQVIDSMS 180
  181 KYKNLLGFFA GNEVTNCQSN IDASPFVRAA IRDCKKYINQ QGYRKIPIGY ASNDDANIRK 240
  241 NLANYFVCQL DEDEDKGQEH LNSQADFFAI NVYEWCGYST YTTSGYRDLT TMFKDYSVPV 300
  301 FFSEFGCNII TPRPFTEVEA IYGSTMKKVW SGGIAYEYFE EVNHYGILLT KKDGSITKLP 360
  361 DFDTLKMRFH AATPIGITMD EATICEPPIC SNSVINDKSS SSSSSSSFWD VALTLPPTPN 420
  421 EAKCECLWQS LSCVVSEDAT FDEEVALREL CFKVDCEDIN ANGRSGKYGR YSDCNPTVRT 480
  481 SYALNKYYEQ CGKKQEICDF QGRGELLPNR NGGLQDLENK FSSDGQNCLS LLEGKEEEKE 540
  541 VQEEEPGVPG LPGSNKGKEV ENTPKGKGKG KSKEKEKGKL IEEEEEEEEE EEENNKTPSS 600
  601 GEKSPKTSKS IAGGNAITFK NDSIWKTFIE ILFTCSAAIL I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle