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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.8638, orf1...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSFGINNI SKGNNTYKDK PAGGALPLFY KDKVPAFHPA HTSKNKKRIL MLLKGFMLSL  60
   61 VLYAVYHLAS NGGQFMFDFS GQSKWERAQS EVRQAMLDSW HTYEKYGWGY DVYHPIKQEG 120
  121 ENMGPKPLGW MIVDSLDTLM IMDCPEEVSR ARDWIKNDLD YTFDYNVNTF ETTIRMLGGL 180
  181 LSAYHFSNDD VYLDKAVQLA NALHGAYDSP SGIPYSSVNL KSGKGIKNHV DNGASSTAEA 240
  241 ATVQLEMKYL SKLTGEILWW NLAEKVMQVL ESNKPQDGLV PIYVNPDTGK YQGHLIRLGS 300
  301 RGDSYYEYLL KQYLQTNKQE LVYWDMYRES VEGVKKHLVS DSYPSGLTFI GELDNGIGGK 360
  361 LSTKMDHLVC FYGGLLALGA TGGLTLNEAQ SLKSWNEERE ADFKLGEELT YTCYKMYHDV 420
  421 SPTGLSPEIV VFNEDTSKSK DFIIKPLDRH NLQRPETVES LFYLYRLTGD VKYREMGYEI 480
  481 FQNFIKYTKV VNSEGEVSFS SLSDVTSFDS NGLPKFKDNT ESFWWAETLK YLYLLFDDTN 540
  541 KIPLTDYVFN TEAHPFPRFD TNDYFKTGWR RKIDENEKAQ MRESKVIDKS NLPEAQPVDK 600
  601 SADQEAKEII EEIAG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle