YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.8380, orf1...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCVYMGTKKL SKIFFFREFC QCIIFSIILS ITYNRLTTHH INMISITKVI SQQFKSSNIT  60
   61 KNLFNATPRI INPITTGSLY QPIRGFKVRT SVKCMCKDCY LVKRKGRVYV YCKSNGKHKQ 120
  121 RQG

Type	Start	End	Confidence
Cytoplasmic	1	12	0.76
Transmembrane Helix	13	33	0.79
Non-Cytoplasmic	34	123	0.88