YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68485314, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSTHQYIL YFVGTLLLVH SGYSSFEFHK ISTHYHTDYR LPPLDIILES VIGIILLVIG  60
   61 SIVSIQNQPF LSIANDKHNM IIKNDSKYLR FIEMKDAVQL SEKIGITDYE EYNSRASFID 120
  121 INQKRKEYND WLEKE

Type	Start	End	Confidence
Cytoplasmic	1	7	0.56
Transmembrane Helix	8	26	0.87
Non-Cytoplasmic	27	45	0.54
Transmembrane Helix	46	65	0.88
Cytoplasmic	66	135	0.56