YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.5674, orf1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSFSLLSIV SIALAATVSA TSDGTNAYTA YPSVAKTASI NGFADKIYDQ LPECAKECVK  60
   61 QSTSNTPCPY WDTGCLCVMP QFGGAIGDCV AKNCKGKEVD SVESLATSIC SSAGVGEPYW 120
  121 MIPSSVSDAL AKAANAASAT TSAETATKSA AAELATTSDT TIVASTSHES KVAETSDAQQ 180
  181 TASIEKSSAA ETSRAKETSK AEESSKAEET SVAQSSSSAN VASVSAETAN AGNMPVIAIG 240
  241 GVIAAFAALI

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	250	0.98