YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9963988
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLALSLLSIV SIASAAGVTA IPEGDNPYTI FPSVAKTASI NGFADRIYDQ LPECAKECVK  60
   61 QSTSSTPCPY WDTGCLCVMP QFAGAVGNCV AKNCKGKEVG SVESLATSIC SSAGVWEPYW 120
  121 MIPSSVSDAL AKAADAAAET TAESTTAEST AAETTKAEET SAKETTAAET SKAAESSAPA 180
  181 ETSKAEETSK AAETTKAEES SVAQSSSSAA DVASVSVEAA NAGNMPAVAI GGVIAAVAAL 240
  241 F

Type	Start	End	Confidence
Signal Peptide	1	20	0.94
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	241	0.99