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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6941, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDTSDLKPE HTEKATGLST SKEVPESTLT QRKQPSTPAT QTSKRPTPAK KKRAFINVAP  60
   61 LNTPLSHRLE TLGVVWHCIS IPFFICLFFF MISLGLFGWI VIVLPYFIWW YGFDLHTPTN 120
  121 GKVAYRYRNS MKNFIIWDWF VRYFPIKVYK SVELEPTFKE VLVEETESSE DDDEQDLVSE 180
  181 RSRTLVDKVF KFFGLKKRLN DTSSGKSETY KTVSTGPRYI FGYHPHGVIS MGGVGLFATN 240
  241 SLRNEPYTPF LKFLKPFFHD SSKGERLFPG LGNIFLLTIT TQFAIPFYRD YLMGLGVTSA 300
  301 SAKNIRSLIS NGDNSVCIVV GGAEESLLNN MVAKHARVGY GYKENQDING SDAEDDQPEE 360
  361 EEQQQQQQPN GSVEVDKKTT KEVGEKTSSQ PSKREVKLIL NKRKGFVKLA IELGNVALVP 420
  421 TFAFGEADVY RLVQPSPTSM MYKFQKWMKG IFSFTIPLFS ARGVFIYDYG LLPFRNPINI 480
  481 CVGKPIYIPA GALQEYKQQH PEEFTEEETK PPMKKSGSFT DIFKMNGETP KVSTIKTKIP 540
  541 PALLDKYHKL YVDELRNVYE ENKHKFGYGD VEFSIVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle