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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.14190, orf...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.57
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLNSVALLS LVATALAAKA PFKIDFEVRR GESKDDLSPE DDSNPRFVKR DGSLDMTLTN  60
   61 KQTFYMATLK IGSNEDENRV LVDTGSSDLW VMSHDLKCVS APNSKRNERS FGHGTGVKLN 120
  121 ERELMQKRKN LYQPSRTIET DEEKEASEKI HNKLFGFGSI YSTVYITEGP GAYSTFSPFV 180
  181 GTEGGSGGSG GSNTCTSYGS FNTENSDTFK KNNTNDFEIQ YADDTSAIGI WGYDDVTISN 240
  241 VTVKDLSFAI ANETSSDVGV LGIGLPGLEV TTQYGYTYQN LPLKLKADGI IAKSLYSLYL 300
  301 NTADAKAGSI LFGAIDHAKY QGDLVTVKMM RTYSQISYPV RIQVPVSKID VESSSGSTTN 360
  361 ILSSTTGVVL DTGSTLSYVF SDTLQSLGKA LNGQYSNSVG AYVVNCNLAD SSRTVDIEFG 420
  421 GNKTIKVPIS DLVLQASKST CILGVMQQSS SSSYMLFGDN ILRSAYIVYD LDDYEVSLAQ 480
  481 VSYTNKESIE VIGASGITNS SGSGTTSSSG TSTSTSTRHS AGSIISNPVY GLLLSLLISY 540
  541 YVLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle