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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.7832, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKRKLIFT LLNILFLFFL QSLSNNHNMS TTTAAVLPTV QLQVNYNEVK TIAKDFITKF  60
   61 KDSMIDIDDE INQTHEGKYM NILQQVANRQ KTSINIEFDD LKLFLTNYDP DSSNTYQEAR 120
  121 RLLPTMLTNT RHFVELFSQV IDDLMPEPTE EISYRDDVLD VILHQRRLRN ARLQQESNEE 180
  181 FNQLRDGFTQ PDSAAANVGG QEDNIANPTD ANLFPAKLTR RYCLYFVPLS NAKALSVRQT 240
  241 KGKFVGHFIT VRGIVTRVSD VKPSALVIAY TCDKCGYEIF QEVNSKTFTP LTECNSPSCV 300
  301 NDNNKGQLFM STRASKFSAF QEVKIQELSS QVPVGHIPRS LTVHVNGDLV RSMNPGDTVD 360
  361 LSGIFMPSPY TGYRALKAGL LTETYLEAQH VKQHKKQYDS MTLSSQAQDK IDELLLQGDV 420
  421 YNKLAKSIAP EIYGHLDVKK ILLLLLCGGV TKEIGDGLKI RGDINVCLMG DPGVAKSQLL 480
  481 KAIGKIAPRS VYTTGRGSSG VGLTAAVMRD PITDEMVLEG GALVLADNGI CCIDEFDKMD 540
  541 ESDRTAIHEV MEQQTISIAK AGITTTLNAR TSILAAANPL YGRYNPRLSP HENINLPAAL 600
  601 LSRFDIMFLI LDQPSRENDE KLAQHVAYVH MHNKQPDMDF TPVDFNTIRE YISRAKTFKP 660
  661 VVAKEVGEYV VQEYVKMRKE SHRNEGSTKK FSHVTPRSLL AILRLAQASA RLRFDNQVRL 720
  721 DDVDEAIRLI EVSKSSYKER EVEDESSTTK IYNIIKSIVT QDGGDRVALD QIKDRVIAKG 780
  781 FTLEQFEHCI MEYDGIWQVV DDGENLLIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle