YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.10982, orf...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVLFFFFFF FTMGCLSLLW LVGTENLSPI TATTHKKKKI STHRHQIKNL TSHTQILSLN  60
   61 VIPPLLPSPL YFHTNSIYPF IMRPLTEEET KVVFEKLANY IGRNISFLID NPENPHVFRL 120
  121 QKDRVYYVQE SIAKFATSVS RQQLMSLGTC FGKFTKTGKF RLHITSLPYL AQYAKFKIWI 180
  181 KQNGEMPFLY GNHVLKAHIG RMSDDIPEHA GVIIYSMNDI PLGFGASAKS TAEARNLPPT 240
  241 GIVAFRQGDI GEYLREEDTL FT

Type	Start	End	Confidence
Signal Peptide	1	24	0.70
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	262	0.90