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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.3470
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFGQILLFA CSILYLSTGG RWTVVALVFV LYILYNKDQQ QQQQPPQPQQ QQQQQQQQQQ  60
   61 QQQQQQQQQL KPSVPPLAKP KKESPIYAVD FTFSSKAFTP STTTTFPIRR VIAPRPKRSP 120
  121 KIFTASKPIV QQQQQQQQRQ PVLTKTTVEL KKCQIYIFYT TLTGSSQRIA KSLYEKLQNL 180
  181 ENLELEPKLL SLDDDVDDLE EYFLNAPTQN DNNCIYLLVL PSYETDSPID YFLEHLIDTA 240
  241 QDFRIDKYPL RKLIGFSVLG LGDSESWSHD NKFCYQAKLA DKWLGKLGAR RLYPLGEICM 300
  301 KYEGEPKAQE WIQNFASLIV NNDNEPFYID DNNNDDDIDD SDAEESEGSD DADTLVDVED 360
  361 MGDIIRKSGK TTTIGGGGIE TKEMVAKDSP TFKSLTKQGY TIVGSHSGVK ICRWTKSALR 420
  421 GRGSCYKFAF YGIKSHLCME TTPSLACSNK CVFCWRHGIN PVAKSNWRWE VDPPEKVMAG 480
  481 ALEGHYQKIK QLRGVPGIQM DRFEEAFKVR HCALSLVGEP IFYPYINEFV GMLHEQHISS 540
  541 FLVCNAQHPD SLAKLTKVTQ LYVSIDAPTK KDLKKVDRPL NSDFWERLMS CLDILRTIQS 600
  601 HQRTVFRLTL VKGFNMEDIE SYADMVERAK PSQIEIKGAT FCGSSNGNGN PLTMQNIPFY 660
  661 EECKNFVENL NKELQSRGLD YDIAAEHAHS CCILVADKKF MINGKWHTHI DYPKFFELLE 720
  721 SGKEFVDLDY VKETPEWAVW GSQGAGFNPE DTKYDRKAEK LKKKAIRDEQ AKKLLEQQQQ 780
  781 QQQQQQETVQ AKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle