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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.1191, orf1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVHYIILSL WSLLVLASTN NDEHYTQAVI GLEQLARNFT RPNVYNIDNI EGNLYIPQFD  60
   61 QLTNDYKSKQ EKPQPPLELT RRIIPLLKKS ASESRNVNAL VTLGDLYLFG NYSLTPDYYM 120
  121 AKEYYQEAVS LAPNGHAYFM LGYIYSTGLF GTFPVDQERG VLYYQFAVEN GDRNAQMVMA 180
  181 YKNFKGLGVP KNCELALEYY TDLVEQGKDW MSRNDADGQV DYNIRISDFN GGLYGEKMSE 240
  241 TTSTIEIRSK YFKDLRNSFE EYKLTANEHE YATLFYNALE SYKGDYFVPK NLTKAFLTFQ 300
  301 ECVDLGEEIY GASDYKNIDG IDKMFLSSCQ SKLGRMYLKG MGVSNNTKKA KQILDRSLKV 360
  361 QGTPEALNLL GFIEDQGLLG EPNVTKAVDY YVAAIKKKSS EANRNLAKLL MRMNGGDPHT 420
  421 SEHHKEIYTY MKDAVYHRDT EALYYMGSFL QSGLSKIADS KNDISCPNIV MYYRVFLERL 480
  481 SSFYAPHLKF AFEELIAGNY QNALIGYSIA AEHGFEEAQI SAAYLLYQLQ PLYSKQPPKT 540
  541 FVPERVEMAV DYLERASKQS NVDATILLGD LYSGQAGASH ITPDFDRAFN YYRTAAERES 600
  601 SHGAYKLAEM YEYGIGPANN SVDYFMAKRY YDFSLKYNEM LNHAKSESPS QFVSGKTHID 660
  661 WALLRLRLKY LFNRSASKQS GNSDGGWLSA FKKVGNRVPN EVPQDSNSIS RANAHHEGGT 720
  721 YNDDLIEEYD IGDYLVIAMT FIFFFVFFVQ NILRQFRRMR NGQRRDEANN NNNNGDDNDD 780
  781 NQGQNGWNGN QFHFRRGNFE FHFFAI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle