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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.2129, orf1...
Protein type: Transmembrane
Type Confidence: 0.44
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKFSFFGG GFFWGGYINT QSHVYWGTHA FTIPRSSYIA SLLTVLGADA LSNYGKGVFV  60
   61 GGYPGIWHND KPDLITELLT RKDTNERVLQ YSNDNDLFFK KRDAIIKELR NDTTTADITS 120
  121 EVSTIPVSLP KIKFEMPRPE TKVNIDEQWI EEENKRFRKR LKRFAKKSTG GAIRASRSKI 180
  181 KASIFKSYEA GEIIRIDKVL VLVMKPPGSG RVSERWREYI AVLRKTDSVA EPLMLQFYDI 240
  241 DKSPEESHPR VGFRLNTQVK ADFYSYLDKT ISLTVLEKVQ YILRLNNQTN SFRWLYFIKE 300
  301 TLGVETEINL FNIYVPRLGY FIEVEVPESV FANHFRSNQN IVVTKHEAGY EIECDGISQY 360
  361 LKQFLPKGLS RGWFCFRKYD RLEWAGSTGE QLFIQNMLFS QNHQLEYREY EASDVPPRPI 420
  421 EGFLGRLTNV SGKEKSVLRD FHKISYFYTN RNLLFFTKYY RAVPPPQGGD SLVNEVDLFG 480
  481 DGHMEWLESD FDGHNKAIVE EIGRRTDMIV KAEGVIDMAD ICEVNISHST QTQNLVHCAL 540
  541 WYSKPELASE KEIVDSCFEI QLKWGALIKL QAQNQAARDI WITSLNDMCR YWKRRQTETL 600
  601 ANHIQISANN IERLSATQYA DSNASDEINF LESQHAIACG ASIPHLLPNM LVIKSGYLYE 660
  661 KNKKHASFNH FYVVLCPGYL IIYHTFRRSR GTGTPKSTAF YEHYITIPLS QCYVYTGKLT 720
  721 ELDLLNCETR TTQVDTHSVP RVYPDGWKSM EEDCELCFTL WFGKKRNISH YEKQLPKSLE 780
  781 VGVQNEKNPG MVTMIRKLGI TGKSIMFTAN SRQERDRWTM CILSEMDRLT GQM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle