YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.6126, orf1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRSIKSSL KRTTALARPT AAKSALKIAN ASSVRSLHIK NTSSYRPTPF LTFQRYASVS  60
   61 VKVPDMAESI TEGTLAAFNK EVGDFVSQDE TIATIETDKI DVEVNAPVSG TITEFLVDVD 120
  121 ATVEVGQEII KMEEGDAPAG GASASEAPAK KEEAPEKAKE ESAPAAAPKK EETKKEEPKK 180
  181 ESKPAPKKEE SKKSTQSTTS APTFTNFSRN EERVKMNRMR LRIAERLKES QNTAASLTTF 240
  241 NEVDMSNLMD FRKKYKDEFI EKTGIKLGFM GAFSKASALA LKEIPAVNAA IENNDTLVFK 300
  301 DYADISIAVA TPKGLVTPVV RNAESLSILG IEKEISNLGK KARDGKLTLE DMTGGTFTIS 360
  361 NGGVFGSLYG TPIINMPQTA VLGLHGVKER PVTVNGQIVS RPMMYLALTY DHRVVDGREA 420
  421 VIFLRTIKEL IEDPRKMLLL E

Type	Start	End	Confidence
Signal Peptide	1	24	0.60
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	441	0.99