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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46433678, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTYHSTQDE QSSNTEESSQ DAAPRPVSPS EVPADDREAT QLESQPLLDP DDPRVSPLKL  60
   61 ERIRLLKVIA TTLVYVNLVL FVILLVSQFF AIPGFNNRGK SFLGLDLALV SLFINLTTNW 120
  121 FFAVPAYYER ILGYITSGLL LIDFIVAFLV SPIRQSLGLL DLSLIAWVCL NSLFNSLIGY 180
  181 WVEEGKHYQE IRLTGRIEKR KTISELVIIF FKVLGEIIIL WIVWCISLTL WINCFDTHEK 240
  241 PWGKLVPVNN NQFRVHLACF GDVHGKSDQP IVLVEGGQST SSEAFQEWIE ELHHLNKVER 300
  301 YCIWDRPGYG FSDSAPPPES LGIVTEYLME ALRKEKIEGP FSVVGFDIGG LYARMFASRN 360
  361 RAKIQSILFV DSWSPDLLKK WPFSGSGRKN ESTKVFKKSL EVMDNITGFK LWLRGFVSPL 420
  421 GVLPNLHWFL HPMRFSSKSR IFGRDMVYSS KYIRARCQEQ LVSGILSYNE IMDADINDLN 480
  481 VGVISSDFMI KKSLNWGKWQ NEISKLSRKT SEWVIAENSD HFIWNSPKGR KELQQLLLRL 540
  541 IGEQEYLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle