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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46433496, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALEQSLAQL SLATVASPEN GKALPTKSLI FKPKTAKTAT PIPLFVFALQ DTTTPSNLIA  60
   61 KSAGVKEPRL AKDDLVEEFF KTTTKEVSIA NLSKELAGKI KIVIDDNVLK AAKNEELLKL 120
  121 STQSSAAVLS AKTVVEFLQS TGIEIIEVDF SAEPTQAPAS ASPGGSGAAA SSKKEKKDDA 180
  181 KLEDAKLIGI TVDKEKDFSS WYTQVVTKGE MLDYYDVSGC YILRPNSYFV WETIQDWFNA 240
  241 RIKKLGVQNT YFPMFVSQRV LEKEKDHIEG FAPEVAWVTR AGNSELDEHI AIRPTSETVM 300
  301 YPYYAKWIRS HRDLPLKLNQ WNSVVRWEFK HPQPFLRTRE FLWQEGHTAH LTKDAAANEV 360
  361 LQILDYYAGV YEELLAVPVV KGKKTENEKF AGGDYTTTVE GFIAATGRGI QGGTSHHLGT 420
  421 NFSKMFNISV ENPEGSEKPR IFAYQNSWGL STRVIGVMIM THSDNKGLVL PPRIAQYQAV 480
  481 VIPVGLTSKS TDAQRKEINE GAEKIEQSLR ANGIRVTGDY REIYNPGWKF ADWELKGVPL 540
  541 RFEFGPKDLA GNQVTIVRRN DGKKYTVKLD ELDTEVPKLL DQMHDDLLTK AKQEFDEHRV 600
  601 KVDEWKDFVP TLNKKNVILS PWCGDADCED DIKDSSAKKD DGEEEEVDEK APSMGAKSLC 660
  661 IPFEQPELKE GQKCVKCDRK AVTYCMFGRS Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle