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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.11955, orf...
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISFISLRRR KLISILAIFT IFILSGSIIG YYNGHHHIIK MVENYTPDDF QNSITALTNK  60
   61 FDFSYLPGFK GIITKNNSTS FESLDDLDIN GFSLIPGNVQ FKFLNKGNKK GTPEQILEQN 120
  121 MKDYKELLGS KTIGQPKDAK LVPPPPPEEL PNYKRANATI LSLVRNGELG AIGSSIKRLQ 180
  181 KKFNSKYNYP YTFLNDEPFT DRFKQRILKY TGNAPVEFVQ IKPEYWQKPS FIDTVKEAKE 240
  241 MEIMFKHDVA YAKKQSYHNM CRFYSSQFYK IPELQKYKYY WRVEPKVNFF TDINYDVFKY 300
  301 MEDTQKIYGF TINLYDNEET VKTLWPETIK YLNQGDNYKY INPKGSFQWL LEDLQNPKKT 360
  361 KFAGGYSTCH FWSNFEIGDF DFFRNEAYDN WVKYLDSTGK FYYERWGDAP VHSIGVSLFA 420
  421 DKDKIHFFKD IGYDHDPYTN CPNTETTQMC EIGKFSRWEH LYDQNCLMNW LHHDQPKDVY 480
  481 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle