YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.4468
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISTYSRIGL TTLTKSSSSS SLTTTVRPLL LANFTRGIKT IPQPPGYIVG TVNDAYVPPP  60
   61 PHKLEGSLHW TSERIVAIGM LPLVLAPFIT GGGASTLIDS TMSALLLFHC HTGFQSCIID 120
  121 DIPKRVYGSY HNYAMYLLTF GTGIAGYGIY QIETKEGGVS NIISKLWKA

Type	Start	End	Confidence
Cytoplasmic	1	74	0.92
Transmembrane Helix	75	98	0.84
Non-Cytoplasmic	99	132	0.76
Transmembrane Helix	133	152	0.82
Cytoplasmic	153	169	0.71