YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CBP4_CANAL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAVKPLWYR WARVYFAGGC LVGTGVLFWY TIRPTDEQLI ARFSPEVKAD YERNKELRQQ  60
   61 EQKRLIEIVK ETSSSSDPIW KAGPIGSPFE KEQRNLSMEL VDAELFHKTK HEEQQKQEID 120
  121 RANEESKEAE RLMQQNKKPW WKFF

Type	Start	End	Confidence
Cytoplasmic	1	10	0.85
Transmembrane Helix	11	32	0.93
Non-Cytoplasmic	33	144	0.88