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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ALG1_CANAL
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEIIKYKGF DHVWQYSGPW LYCLIGIYIS LPVLAYHILP WIFHKNRSNK RKTISIFVLG  60
   61 DLGHSPRMCY HASSFSKLDY YVNLCGYVET EPSHQIVDDV NIDIIPIEAI KNTNNLPYIM 120
  121 FAILKVVRQC GKIWSILWDT RGSDYIMIQN PPSIPILLIV ILFKTVFSRE TKLIIDWHNL 180
  181 NYTILNLRYN NLNHPFVKLV KLYEKILGQF ANLNITVTKS MKKYLVKEFG FQKSKIVTLY 240
  241 DRPGVQFQPL SNKREFMSEH KLFEDIDIEK YKVLISSTSF TPDEDFNILL DALKNYENTP 300
  301 NTPPILLIVT GKGPLKGKFL ETVDKLEFTN KVCVKSAWLS SEDYPKVLAC ADLGISLHTS 360
  361 SSGIDLPMKI VDFFGCGVPV VSLDFPAIDE LVKNKVNGLI TNSKSDQTKE VARLVTEVFT 420
  421 DDALLRSIKE GALEESNSRW DENWMQTFSS IFENKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle