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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4409, orf1...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSINYNAQPH AVDVPVTDMD DPEDDIIFAE QASTQQNRTR SSFLDNLDFE NNNARSESGG  60
   61 ILNKFRSFFE SRARQNDDYE MVSRFDVDST NESDDLDNQP PIDIRERRLQ LLEKQVKNRT 120
  121 VVGSIFLLTV GILTFVLFFN KNSVTLLLNS GPSRKIYSNS THEFHQTTIL ISLDGFHPHY 180
  181 INPLDTPTMH NIMKNDYGAP YMTPSFPSST FPNHWTLITG LYPSEHGIVG NTFYDPELKK 240
  241 QFINTNPKVG GLDPDFWRGG EPIWKTAKRQ NVRSAVHMWP GSEVPHIGPT DDFDRYNGSE 300
  301 LLSSKVDRVM GWIDRESIET RPELILTYVP TIDQFGHKYG ISGQNLTEAL TYVDNFIDLM 360
  361 QQEIHKRNLD EIVNMIIVSD HGMAPTSNDR LLYLDDLVDF DKIEHIDGWP LFGLRPKGNI 420
  421 NDFYTELSDN FDKLDSKVTS HYHIYKVEDI PPEFQFGGEI TAHKYNYRLA PIWILPDVGY 480
  481 SITTHKQMED NGFQYKPKGV HGYNNTHLLM RAIFLGTGPY FRNKNLKVEP FANTEVYNLI 540
  541 CDTLDIVPAP NNGSLPHEIW SQKLPDEWKD DLTFPNLPFQ VEHIVRTNAT YDLLWRKGDE 600
  601 AKIDPAPAPT NKHPVESMKS EESTITSLET ESLPKPSDFI SSSTGTTMET STTTKAHEGF 660
  661 GKIVGDIIGG IEDGFDAIGG VVHDFIDDIF N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle