YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|64966420, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWIWKKKSV IVTSLIVVVS LFLVVINCSE KPYFLLQPVF GQSFSRNWMF SRPPHKASKP  60
   61 HHGYLSVPNQ EPLKLHCEVC SVVSSSGQIL GREAGADIDQ SSCIWRMNNA PTRGFERDVG 120
  121 HRTDLRVVSH TSVPLLIQKP QHFFGQGNET VYVVWGPLRN MRQDGKGIVY NMLRQAVENY 180
  181 PQARIYVTTE ERMNYCDTVF KKETGKDRIQ SGSYLSTGWF TLILAMDMCK EIRVYGMIND 240
  241 TYCKSEGYKK VPYHYYEAGS RDECAEYLLH ESAPYGGHRF ITEKAVFAKW AKTHPIKFFS 300
  301 PEWQLS

Type	Start	End	Confidence
Signal Peptide	1	28	0.84
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	306	0.99