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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.10310, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLPIQDLEP DYYISVNYPT TDNGSPTPQA EKSLKTLIDL LYDKGFAAQI RPGDLDHLLV  60
   61 FVKLSSYKFS EEAEKDLIKN YEFGVTGKDD VLASKLRIIY QYLTYPQSVG GCGITPNSGD 120
  121 WKFVTSIVPI TNAFNETTLV EDLKINVTQP NLSIATIKKT YGVEVALYFE YIKHYTFWLL 180
  181 LLSIIGLVSH FRKDKRFSLT FAFINLLWGV LFLASWHRRE QHLVNVWGVQ NSHLIEEHNS 240
  241 ELAKVNERYE EKSTYFHANN TNGFRFLKQL AFIPIALVFV GVLISYQLSC FCIEIFLTDI 300
  301 YDGPGKSLLT LLPTVLISVF VPILTIVYNA VTDIIIKWEN HDNQYSKNNS ILVKTFVLNF 360
  361 LTGYVPLIIT SFIYLPFAHL VQPHLGDIKT TIATYAGENR FYTKYLLKLK SQEEFKINQG 420
  421 RLDAQFFYFI VTNQVIQLVL KYILPLGLRF VFNFIETKIQ KKPQLQTKDD NPDESIWLHN 480
  481 VRLSLKLPEY NVDDDFRGLV LQFGYLIMFG PVWPLAPLVC IIFNLIFFKL DNFKLLNGKY 540
  541 FKPPVPRRVD SIHPWNLALF LLAWIGSIIS PVVTAFYRHG TAPPKSMGQF ALDKASVHVS 600
  601 SSVFLVLLMF VSEHGFLILS YLLFEFSSLF KSQVEWENDF VDNDIKLRHD YYSGKVKPTY 660
  661 KVHSDELWEK FTPQSTLNFT VPKPTAETDD KVEKIASTEG AYSTSAEKST TTATSRSDKS 720
  721 KILAEKEAIL KQKEAELAEL EKKKTKLNDF KDPTDSVIKT KSSANGKAVL STIDNNKHVS 780
  781 DIDPDAAAAA TATSTANDSG AKKSTSTSTS AATDTTNTAP SHSGPTPVTS SEKSNNNNNS 840
  841 KPSDSTKSTL ANDETRKTLD PKGVGSTTTG DKDTVSSDKA SSPIEDKESS PSLAGSSTST 900
  901 PSGTDKKTSP KKLVTNAVNK VENNDDFKKF INEAEKEAKK SKSGLKKLFN KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle