YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.10871, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGEHLRKA LIKNYSFYYI AYDDLKHQLK KGLYDNDGIW NNDLEESFLN ALETELDKVY  60
   61 SFTKVKNTEV NRRIKESESY VYEVVDALHR YENHDPSITN PPSEEDFQDL EEELSDIIAD 120
  121 VHDLAKFTRL NYTGFQKIIK KHDKTTKFTL KPVFQARLNA KAFYKDNYDN LIVKLSKLYD 180
  181 LVRTRGNPVK GDSAAGGGQQ NFVRQTTKYW VHPDNITELK LIILKHLPVL VFNADKEFEP 240
  241 EDSAITSIYF DNKDMDLYYG RLRKDEGAEA LRLRWYGGMK SEQIFVERKT HREDWTGEKS 300
  301 VKARFALKEK KVNQFLSGEL TASQVFEKMR KEGKKSPQEI DNLERLAKEC QYRILKEKYR 360
  361 PVMRSFYNRT AFQLPGDARV RISLDTELTM VREDNFDGYD RTHGNWRRMD IGVDYPFPQL 420
  421 PEKDVCRFPY AVLEVKLQTQ MGQEPPAWVR DLVTSHLVEA VPKFSKFIHG GATLLTDYVN 480
  481 LLPFWYTQMD VDIRKPKIQQ EYGIRRNAPL RIESSTSANE LDEEELSGYS GSGVQFSNDI 540
  541 NPLEEDLEET SPLLFQNSHR SRQGNSFFNQ LMSYFKDDRE FTVKEGTNFD LNGTFKDKLP 600
  601 KGKSICVPIR IEPKVYLANE RTFLSWLSVG MLIGGVATAL LNYGSNSTLT ASIGFFIAAL 660
  661 FIIGYSTYKY LWRVLMIREK KAVAYGDKFG PNMICGVIFL AIFINYLVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle