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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.11137, orf...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLELAVAA VLGSQLLEAK YLISDDLSLA STVARNALPY LWKSSRGRAS YWYSFEDSAL  60
   61 RYSNNKALAF PRPKKNPPKP QVDENGYSIY DDQFDLEEFT YKELYDMVLR YSYILKNEYG 120
  121 VTSNDTIGVA CMNKPLFIIL WLALWNIGAL PAFLNFNTKD KPLVHCLKIA NVSQVFVDPD 180
  181 CDKPIRDTES QIAEELPNTK IHYIDELALF DRLRLKSTPK HRAKDSTRRP QDTDSSACAL 240
  241 IYTSGTTGLP KAGIMSWRKA FMASVIFGHI MKIKENSSVL TAMPLYHSTA AMLGVCPTLI 300
  301 VGGCVTVSQK FSATSFWTQA RLCGATHIQY VGEVCRYLLN SKPHPDQDRH NVRIAYGNGL 360
  361 RRDIWSEFKS RFHIDGIGEF YAATESPIAT TNLQYGEYGV GACRKYGSII NLFLSTQQKL 420
  421 AKMDPEDESE IWRDPKTGLC TEAAYNEPGE LMMRILNPQD IEKSFQGYYG NKSATNSKIL 480
  481 TNVFSKGDAW YRSGDLLKMD EDKLLYFVDR LGDTFRWKSE NVSATEVENE LMGSKTLKQS 540
  541 VVVGVKVPNH EGRACFAVCE PKDELQHEEI LKAIHEHVTK SLPSYAQPAF LKIGAIEASH 600
  601 NHKVPKNQFK NQKLPKGEDG KEMIYWLNGD KYTELTEDDW SSICAGKAKL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle